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Protein superfamily
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#	Item
1	Protein sequence databases Rolf Apweiler1,, Amos Bairoch2 and Cathy H Wu3 A variety of protein sequence databases exist, ranging from simple sequence repositories, which store data with little or no manual intervention Add to Reading List Source URL: www.proteininformationresource.org Language: English - Date: 2005-11-21 12:41:35 Bioinformatics Biological databases Biology UniProt Amos Bairoch Sequence database Protein Information Resource PROSITE European Bioinformatics Institute National Center for Biotechnology Information Pfam Superfamily database
2	Microsoft Word - PIR_brochure_073007.doc Add to Reading List Source URL: www.proteininformationresource.org Language: English - Date: 2007-07-30 10:36:42 Bioinformatics Biological databases Biology UniProt InterPro Protein Information Resource Superfamily database Protein family PROSITE Protein superfamily Pfam Gene ontology
3	Table of Contents Use Cases (Target Problems)...........................................................................................................................1 Family alignment: identify homologues, generate fa Add to Reading List Source URL: informatics.nescent.org Language: English - Date: 2016-04-13 13:52:16 Biology Bioinformatics Computational phylogenetics Genetics Population genetics Molecular biology Protein structure Sequence alignment Single-nucleotide polymorphism BLAST Protein superfamily Conserved sequence
4	1 Large-scale multiple sequence alignment and phylogeny estimation Tandy Warnow1,∗ 1 Department of Computer Science, University of Texas at Austin, Austin, Add to Reading List Source URL: web.engr.illinois.edu Language: English - Date: 2014-08-30 16:01:16 Computational phylogenetics Bioinformatics Biology Multiple sequence alignment Sequence alignment Phylogenetic tree Maximum parsimony Structural alignment Protein superfamily Clustal Phylo BAli-Phy
5	284–285  1999 Oxford University Press Nucleic Acids Research, 1999, Vol. 27, No. 1 Add to Reading List Source URL: www.proteininformationresource.org Language: English - Date: 2005-11-21 12:41:46 Biology Bioinformatics Biological databases Computational phylogenetics Genomics Protein structure Protein superfamily Superfamily database Sequence alignment Protein Information Resource Homology Sequence database
6	Genome Informatics 13: 163–Folding Pattern Recognition in Proteins Using Spectral Analysis Methods Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2002-12-09 05:53:40 Bioinformatics Biology Protein structure Computational phylogenetics Protein methods Structural biology Threading Multiple sequence alignment Sequence alignment Protein structure prediction Protein superfamily Protein folding
7	# 2003 Oxford University Press Nucleic Acids Research, 2003, Vol. 31, No. 1 DOI: nar/gkg040 Add to Reading List Source URL: www.proteininformationresource.org Language: English - Date: 2005-11-21 12:41:45 Bioinformatics Biological databases Biology Sequence database Protein Information Resource UniProt Superfamily database FASTA format BLAST Amos Bairoch Protein superfamily FASTA
8	Sequence Classification For Protein Analysis Sepp Hochreiter and Klaus Obermayer Technische Universit¨at Berlin To analyze the sequential data obtained from genome sequencing (DNA and the translated protein sequences), Add to Reading List Source URL: www.bioinf.jku.at Language: English - Date: 2013-01-23 02:38:18 Artificial neural networks Computational neuroscience Bioinformatics Computational biology Sepp Hochreiter Protein structure Long short-term memory Sequence alignment Artificial intelligence Protein superfamily Protein domain Threading
9	© 2002 Oxford University Press Nucleic Acids Research, 2002, Vol. 30, No. 1 35–37 Add to Reading List Source URL: www.proteininformationresource.org Language: English - Date: 2005-11-21 12:41:45 Bioinformatics Biological databases Proteins Proteomics Genomics Protein Information Resource Superfamily database Sequence database Amos Bairoch National Center for Biotechnology Information PROSITE Protein superfamily
10	Computational Biology and Chemistry–96 Database note The iProClass integrated database for protein functional analysis Cathy H. Wu a,∗ , Hongzhan Huang a , Anastasia Nikolskaya a , Add to Reading List Source URL: www.proteininformationresource.org Language: English - Date: 2005-11-21 12:41:34 Bioinformatics Biological databases Proteins Proteomics Genomics InterPro Protein superfamily Protein family Superfamily database UniProt Phosphoglycerate mutase Structural genomics