HMMER

Results: 29



#Item
1

HMMER User’s Guide Biological sequence analysis using profile hidden Markov models Sean R. Eddy and the HMMER development team

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Source URL: eddylab.org

Language: English - Date: 2018-08-06 08:22:20
    2Bioinformatics / Computational phylogenetics / Biology / Mathematical and theoretical biology / HMMER / Sequence alignment / BLAST / Sequence analysis / FASTA / Hidden Markov model / SmithWaterman algorithm / Homology modeling

    September 14, :56 WSPC - Proceedings Trim Size: 9.75in x 6.5in

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    Source URL: www.jsbi.org

    Language: English - Date: 2009-12-21 02:04:19
    3Bioinformatics / Biology / Software / Gene prediction / Sequence alignment / HMMER / BLAST / TimeLogic / Protein kinase / BLAT / Expressed sequence tag / Sequence database

    Materials and Methods Supplemental Online Material for Manning et al (Science 298:Construction and validation of the ePK Hidden Markov Model An ePK domain hidden Markov model (HMM) was built from a manually- a

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    Source URL: kinase.com

    Language: English - Date: 2014-03-08 21:58:29
    4Protein domains / Bioinformatics / Protein structure / Zinc finger / HMMER / Hidden Markov model / Support vector machine

    314 Genome Informatics 13: 314–Classification of C2H2 Zinc Finger Domains Using Support Vector Machines

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    Source URL: www.jsbi.org

    Language: English - Date: 2002-12-19 23:03:31
    5

    HMMER User’s Guide Biological sequence analysis using profile hidden Markov models http://hmmer.org/ Version 3.1b2; February 2015

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    Source URL: eddylab.org

    Language: English - Date: 2015-08-22 11:30:35
      6Computational phylogenetics / Bioinformatics / Multiple sequence alignment / Sequence alignment / MUSCLE / MAFFT / Clustal / Phylo / HMMER / T-Coffee

      PDF Document

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      Source URL: www.cs.utexas.edu

      Language: English - Date: 2014-03-26 11:58:59
      7Sequence alignment / Multiple sequence alignment / BLAST / Sequence analysis / Viterbi algorithm / Hidden Markov model / Pfam / SUPERFAMILY / Homology / Bioinformatics / Science / HMMER

      Johnson et al. BMC Bioinformatics 2010, 11:431 http://www.biomedcentral.com RESEARCH ARTICLE Open Access

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      Source URL: selab.janelia.org

      Language: English - Date: 2014-09-02 13:41:20
      8Statistics / Sequence alignment / HMMER / BLAST / Hidden Markov model / Smith–Waterman algorithm / BLOSUM / Pfam / Stochastic context-free grammar / Bioinformatics / Science / Computational phylogenetics

      A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation Sean R. Eddy* Howard Hughes Medical Institute, Janelia Farm Research Campus, Ashburn, Virginia, United States of Ameri

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      Source URL: selab.janelia.org

      Language: English - Date: 2014-09-02 13:41:13
      9HMMER / Sequence alignment / FASTA / BLAST / Sequence analysis / Hidden Markov model / Smith–Waterman algorithm / BLOSUM / Homology modeling / Bioinformatics / Science / Computational phylogenetics

      Genome InformaticsPages)

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      Source URL: selab.janelia.org

      Language: English - Date: 2014-09-02 13:40:00
      10

      HMMER User’s Guide Biological sequence analysis using profile hidden Markov models http://hmmer.wustl.edu/ Version 2.2; August 2001

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      Source URL: www.csar.cfs.ac.uk

      Language: English - Date: 2004-06-11 07:01:01
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