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Results: 29

#	Item
1	HMMER User’s Guide Biological sequence analysis using profile hidden Markov models Sean R. Eddy and the HMMER development team Add to Reading List Source URL: eddylab.org Language: English - Date: 2018-08-06 08:22:20
2	September 14, :56 WSPC - Proceedings Trim Size: 9.75in x 6.5in Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2009-12-21 02:04:19 Bioinformatics Computational phylogenetics Biology Mathematical and theoretical biology HMMER Sequence alignment BLAST Sequence analysis FASTA Hidden Markov model SmithWaterman algorithm Homology modeling
3	Materials and Methods Supplemental Online Material for Manning et al (Science 298:Construction and validation of the ePK Hidden Markov Model An ePK domain hidden Markov model (HMM) was built from a manually- a Add to Reading List Source URL: kinase.com Language: English - Date: 2014-03-08 21:58:29 Bioinformatics Biology Software Gene prediction Sequence alignment HMMER BLAST TimeLogic Protein kinase BLAT Expressed sequence tag Sequence database
4	314 Genome Informatics 13: 314–Classification of C2H2 Zinc Finger Domains Using Support Vector Machines Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2002-12-19 23:03:31 Protein domains Bioinformatics Protein structure Zinc finger HMMER Hidden Markov model Support vector machine
5	HMMER User’s Guide Biological sequence analysis using profile hidden Markov models http://hmmer.org/ Version 3.1b2; February 2015 Add to Reading List Source URL: eddylab.org Language: English - Date: 2015-08-22 11:30:35
6	PDF Document Add to Reading List Source URL: www.cs.utexas.edu Language: English - Date: 2014-03-26 11:58:59 Computational phylogenetics Bioinformatics Multiple sequence alignment Sequence alignment MUSCLE MAFFT Clustal Phylo HMMER T-Coffee
7	Johnson et al. BMC Bioinformatics 2010, 11:431 http://www.biomedcentral.com RESEARCH ARTICLE Open Access Add to Reading List Source URL: selab.janelia.org Language: English - Date: 2014-09-02 13:41:20 Sequence alignment Multiple sequence alignment BLAST Sequence analysis Viterbi algorithm Hidden Markov model Pfam SUPERFAMILY Homology Bioinformatics Science HMMER
8	A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation Sean R. Eddy* Howard Hughes Medical Institute, Janelia Farm Research Campus, Ashburn, Virginia, United States of Ameri Add to Reading List Source URL: selab.janelia.org Language: English - Date: 2014-09-02 13:41:13 Statistics Sequence alignment HMMER BLAST Hidden Markov model Smith–Waterman algorithm BLOSUM Pfam Stochastic context-free grammar Bioinformatics Science Computational phylogenetics
9	Genome InformaticsPages) Add to Reading List Source URL: selab.janelia.org Language: English - Date: 2014-09-02 13:40:00 HMMER Sequence alignment FASTA BLAST Sequence analysis Hidden Markov model Smith–Waterman algorithm BLOSUM Homology modeling Bioinformatics Science Computational phylogenetics
10	HMMER User’s Guide Biological sequence analysis using profile hidden Markov models http://hmmer.wustl.edu/ Version 2.2; August 2001 Add to Reading List Source URL: www.csar.cfs.ac.uk Language: English - Date: 2004-06-11 07:01:01