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BLOSUM
Results: 49

#	Item
11	Methods LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA Michael Brudno,1 Chuong B. Do,1 Gregory M. Cooper,2 Michael F. Kim,1 Add to Reading List Source URL: lagan.stanford.edu Language: English - Date: 2003-09-07 17:22:43 Bioinformatics Computational phylogenetics Multiple sequence alignment Sequence alignment BLAST BLAT Gap penalty NeedlemanWunsch algorithm Phylo T-Coffee BLOSUM VISTA
12	E MBARRASSMENT OF R ICHES C HALLENGES Indexes in Comparative Genomics Bernhard Haubold Add to Reading List Source URL: guanine.evolbio.mpg.de Language: English - Date: 2010-11-09 12:07:10 Biology Bioinformatics Genomics Genetics Computational phylogenetics Biological databases BLOSUM Genome AhoCorasick algorithm GenBank BLAST Arabidopsis
13	AAindex : A Database of Amino Acid Indices and Mutation Matrices K. Tomii M. Kanehisa Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:20 Bioinformatics Biology Computational phylogenetics Genetics Statistics Sequence alignment Similarity measure Protein structure Amino acid Point accepted mutation BLOSUM
14	22 Genome Informatics 16(1): 22–Improvement in the Accuracy of Multiple Sequence Alignment Program MAFFT Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2005-12-28 10:55:26 Computational phylogenetics Bioinformatics Biology MAFFT Multiple sequence alignment MUSCLE Clustal Sequence alignment ProbCons BLAST BLOSUM Fast Fourier transform
15	Glycan Linkage Substitution Matrix Rooted on Tree Alignments Kiyoko F. Aoki1 Hiroshi Mamitsuka1 Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2005-01-18 03:43:34 Bioinformatics Carbohydrates Glycomics Matrices Carbohydrate chemistry Substitution matrix Glycan BLOSUM Matrix Glycobiology
16	Genome Informatics 15(1): 93–Clustering of Database Sequences for Fast Homology Search Using Upper Bounds on Alignment Score Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2004-05-18 02:23:39 Computational phylogenetics Bioinformatics Biology BLAST FASTA Cluster analysis Sequence SmithWaterman algorithm BLOSUM Sequence clustering Sequence alignment
17	A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation Sean R. Eddy* Howard Hughes Medical Institute, Janelia Farm Research Campus, Ashburn, Virginia, United States of Ameri Add to Reading List Source URL: selab.janelia.org Language: English - Date: 2014-09-02 13:41:13 Statistics Sequence alignment HMMER BLAST Hidden Markov model Smith–Waterman algorithm BLOSUM Pfam Stochastic context-free grammar Bioinformatics Science Computational phylogenetics
18	2014 22nd International Conference on Pattern Recognition S-BLOSUM: classiﬁcation of 2D shapes with biological sequence alignment Pietro Lovato∗ , Alessio Milanese† , Cesare Centomo† , Alejandro Giorgetti† , M Add to Reading List Source URL: profs.sci.univr.it Language: English - Date: 2015-06-16 09:42:08 Biology BLOSUM Substitution matrix Sequence alignment Smith–Waterman algorithm Multiple sequence alignment BLAST Nucleic acid sequence Matrix Bioinformatics Computational phylogenetics Science
19	Genome InformaticsPages) Add to Reading List Source URL: selab.janelia.org Language: English - Date: 2014-09-02 13:40:00 HMMER Sequence alignment FASTA BLAST Sequence analysis Hidden Markov model Smith–Waterman algorithm BLOSUM Homology modeling Bioinformatics Science Computational phylogenetics
20	PDF Document Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-05-06 21:28:10 Computational science Sequence alignment Smith–Waterman algorithm Substitution matrix Gap penalty Needleman–Wunsch algorithm BLOSUM Point accepted mutation Alignment Bioinformatics Computational phylogenetics Science

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