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Point accepted mutation
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1	PAM matrix for BLAST algorithm Churbanov Alexander April 11,2002 Abstract In this paper we will consider math background for PAM (Point Accepted Mutation). PAM matrix is used extensively in BLAST (Basic Local Alignment S Add to Reading List Source URL: bioinfo.ict.ac.cn Language: English - Date: 2014-11-28 11:05:21 Biology Bioinformatics Genetics Computational phylogenetics Point accepted mutation Matrices Molecular biology BLAST Amino acid Position weight matrix Peptide sequence Mutation
2	AAindex : A Database of Amino Acid Indices and Mutation Matrices K. Tomii M. Kanehisa Add to Reading List Source URL: www.jsbi.org Language: English - Date: 1998-01-09 02:50:20 Bioinformatics Biology Computational phylogenetics Genetics Statistics Sequence alignment Similarity measure Protein structure Amino acid Point accepted mutation BLOSUM
3	PDF Document Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-05-06 21:28:10 Computational science Sequence alignment Smith–Waterman algorithm Substitution matrix Gap penalty Needleman–Wunsch algorithm BLOSUM Point accepted mutation Alignment Bioinformatics Computational phylogenetics Science
4	p J . Mol. B d, Amino Acid Substitution Matrices from an Information Theoretic Perspective Add to Reading List Source URL: www.virtual.unal.edu.co Language: English - Date: 2013-05-16 18:26:15 Biology Substitution matrix Sequence alignment Point accepted mutation BLAST STING Smith–Waterman algorithm Matrix Amino acid Bioinformatics Computational phylogenetics Science
5	Pairwise Sequence Alignments Patrick Aboyoun Gentleman Lab Fred Hutchinson Cancer Research Center Seattle, WA April 16, 2015 Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-04-16 22:10:00 Computational science Sequence alignment Smith–Waterman algorithm Substitution matrix Gap penalty Needleman–Wunsch algorithm BLOSUM Point accepted mutation Alignment Bioinformatics Computational phylogenetics Science
6	Amino Acid Substitution Scores Consider the problem of scoring a region of an amino-acid alignment that contains no gaps, such as: GSAQVKGH GNPKVKAH Here we discuss standard ways of assigning a score to each amino acid p Add to Reading List Source URL: globin.cse.psu.edu Language: English - Date: 2002-10-31 14:08:53 Biology Matrices Genetics BLOSUM Point accepted mutation BLAST Substitution matrix Matrix Sequence alignment Bioinformatics Science Computational phylogenetics
7	This article is published in Plant Physiology Online, Plant Physiology Preview Section, which publishes manuscripts accepted for publication after they have been edited and the authors have corrected proofs, but before t Add to Reading List Source URL: www.niab.com Language: English - Date: 2009-10-20 07:51:20 Gene expression DNA RNA Ridge Point mutation Nucleic acid sequence Gene Sense Intron Biology Genetics Molecular biology
8	Proc. Natl. Acad. Sci. USA Vol. 89, pp[removed], November 1992 Biochemistry Add to Reading List Source URL: www.ncbi.nlm.nih.gov Language: English Biology Matrices Genetics BLOSUM Substitution matrix Sequence alignment Point accepted mutation FASTA BLAST Bioinformatics Computational phylogenetics Science
9	Reflections Woman Innovator in Bioinformatics: Dr. Margaret Oakley Dayhoff Add to Reading List Source URL: www.advancedbiotech.in Language: English - Date: 2013-02-19 07:25:38 Margaret Oakley Dayhoff Protein Information Resource Point accepted mutation Nucleic acid sequence Sequence database Protein family Amino acid Nucleic acid Protein Biology Bioinformatics Science
10	PDF Document Add to Reading List Source URL: www.compbio.dundee.ac.uk Language: English - Date: 2001-10-08 08:35:21 Science Matrices Genetics Substitution matrix BLOSUM Sequence alignment Point accepted mutation Multiple sequence alignment FASTA Bioinformatics Computational phylogenetics Biology