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Planted motif search
Results: 9

#	Item
1	RISOTTO: Fast extraction of motifs with mismatches Nadia Pisanti‡ , Alexandra M. Carvalho◦∗, Laurent Marsan∓ and Marie-France Sagot ◦ INESC-ID, Lisbon INRIA Rhˆ Add to Reading List Source URL: pbil.univ-lyon1.fr Language: English - Date: 2008-10-22 02:35:23 Folklore Motif Suffix tree Bioinformatics Planted motif search Formal languages Lie groups
2	Vol. 18 noPages 1382–1390 BIOINFORMATICS Subtle motifs: defining the limits of motif finding Add to Reading List Source URL: www.maths.usyd.edu.au Language: English - Date: 2005-06-21 16:21:29 Mathematics Mathematical analysis Probability Probability distributions Bioinformatics Circuit complexity NC Expected value Net Binomial distribution Planted motif search
3	JOURNAL OF COMPUTATIONAL BIOLOGY Volume 6, Numbers 3/4, 1999 Mary Ann Liebert, Inc. Pp. 369– 386 Disk-Covering, a Fast-Converging Method Add to Reading List Source URL: web.engr.illinois.edu Language: English - Date: 2016-05-15 16:25:24 Graph theory Spanning tree Chordal graph Binary tree Tree Tree decomposition Planted motif search
4	Vol. 18 noPages 1374–1381 BIOINFORMATICS Finding motifs in the twilight zone U. Keich ∗ and P. A. Pevzner Add to Reading List Source URL: www.maths.usyd.edu.au Language: English - Date: 2005-06-21 16:20:27 Bioinformatics Applied mathematics Multiple sequence alignment Pattern recognition NC Learning Expectationmaximization algorithm Artificial intelligence Planted motif search
5	International Journal of Foundations of Computer Science c World Scientific Publishing Company ! A First Approach to Finding Common Motifs With Gaps COSTAS S. ILIOPOULOS∗ Add to Reading List Source URL: pbil.univ-lyon1.fr Language: English - Date: 2008-10-22 02:35:22 Suffix tree String searching algorithm String Generalized suffix tree Trie NP Planted motif search
6	Genome Informatics 15(2): 63–An Extension and Novel Solution to the (l,d )–Motif Challenge Problem Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2004-12-26 23:38:46 Bioinformatics Sequence motif DNA binding site Algorithm Motif Multiple sequence alignment Teiresias algorithm NP Planted motif search Multiple EM for Motif Elicitation
7	A highly scalable algorithm for the extraction of cis-regulatory regions Alexandra M. Carvalho∗ INESC-ID Rua Alves Redol, Lisboa, Portugal Add to Reading List Source URL: pbil.univ-lyon1.fr Language: English - Date: 2008-10-22 02:35:21 Gene expression Networks Bioinformatics Suffix tree Binary trees Tree traversal Gene regulatory network R-tree Rope Algorithm Planted motif search Tree alignment
8	LNCSLongest Motifs with a Functionally Equivalent Central Block Add to Reading List Source URL: pbil.univ-lyon1.fr Language: English - Date: 2008-10-22 02:35:21 Logic in computer science FO Finite model theory Combinatory logic Formal languages Planted motif search
9	34 Genome Informatics 16(1): 34–A Gibbs Sampling Approach to Detection of Tree Motifs Lidio Marx Carvalho Meireles Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2005-12-28 10:55:28 Data types Knowledge representation Computational phylogenetics Frequent subtree mining B-tree Binary trees Tree Planted motif search