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Gillespie algorithm
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1	1 Cellular growth and division in the Gillespie algorithm Ting Lu1 , Dmitri Volfson2,3 , Lev Tsimring2 and Jeff Hasty3 1 Add to Reading List Source URL: biocircuits.ucsd.edu Language: English - Date: 2013-10-11 13:37:10
2	This document will describe the use of BioSPICE Model Definition Language (MDL), which at present is essentially Systems ... Add to Reading List Source URL: sbml.org Language: English - Date: 2008-09-05 17:01:41 Markup languages Acronyms SBML Gillespie algorithm Stochastic differential equation Stochastic simulation Stochastic Economic model Langevin equation Statistics Stochastic processes Systems biology
3	STOCKS ( STOCHastic Kinetic Simulator) VersionAugustExact stochastic simulation of Biochemical kinetics with Gillespie algorithm. Andrzej M. Kierzek Add to Reading List Source URL: www.sysbio.pl Language: English - Date: 2006-05-11 01:08:47
4	Simulating Biochemical Reaction Networks using Lattice Microbes: A Workflow August 3rd, 2012 Piyush Labhsetwar, Elijah Roberts and Zaida Luthey-Schulten Add to Reading List Source URL: www.scs.illinois.edu Language: English - Date: 2012-10-26 21:49:49 Chemical kinetics Probability and statistics Monte Carlo methods Computational chemistry Stochastic models Gillespie algorithm Stochastic simulation MATLAB Reaction rate Statistics Software Stochastic processes
5	Asia Pacific Mathematics Newsletter July 2012 www.asiapacific-mathnews.com Add to Reading List Source URL: www.austms.org.au Language: English - Date: 2012-07-31 22:40:14 Chemical kinetics Chemical engineering Stochastic processes Systems biology Catalysis Mathematical and theoretical biology Gene regulatory network Gillespie algorithm Chemical reaction Chemistry Physical chemistry Science
6	Journal of Computational Physics xxx[removed]xxx–xxx Contents lists available at SciVerse ScienceDirect Journal of Computational Physics journal homepage: www.elsevier.com/locate/jcp Add to Reading List Source URL: www.cse-lab.ethz.ch Language: English - Date: 2013-02-07 13:15:17 Probability and statistics Monte Carlo methods Statistical mechanics Computational physics Computational chemistry Stochastic simulation Gillespie algorithm Kinetic Monte Carlo Static single assignment form Stochastic processes Statistics Applied mathematics
7	Asia Pacific Mathematics Newsletter 1 Mathematical Approachesfor for Analysis Add to Reading List Source URL: www.asiapacific-mathnews.com Language: English - Date: 2012-08-01 02:01:42 Science Gillespie algorithm Mathematical and theoretical biology Reaction rate Chemical reaction Gene regulatory network Stochastic simulation Reaction–diffusion system Enzyme Chemistry Physical chemistry Chemical kinetics
8	Cellular growth and division in the Gillespie algorithm T. Lu, D. Volfson, L. Tsimring and J. Hasty Abstract: Recent experimental studies elucidating the importance of noise in gene regulation have ignited widespread int Add to Reading List Source URL: biodynamics.ucsd.edu Language: English - Date: 2013-10-11 13:34:13 Computational chemistry Gillespie algorithm Gene regulatory network Stochastic simulation Chemical reaction Markov chain Thorn Exponential growth Statistics Stochastic processes Monte Carlo methods
9	BIOINFORMATICS Vol. 00 no[removed]Pages 1–9 Fast stochastic algorithm for simulating evolutionary Add to Reading List Source URL: biodynamics.ucsd.edu Language: English - Date: 2013-10-11 13:34:11 Stochastic simulation Gillespie algorithm Population genetics Mutation Quasispecies model Fitness landscape Viral quasispecies Evolution Natural selection Evolutionary biology Biology Philosophy of biology
10	Fast Simulation of Robust Stochastic Chemical Reaction Networks David Soloveichik Erik Winfree group David Soloveichik, “Robust Stochastic Chemical Reaction Networks and Bounded Tau-Leaping”, Add to Reading List Source URL: solo.ucsf.edu Language: English - Date: 2013-06-05 22:02:51 Probability and statistics Stochastic simulation Operations research Stochastic Simulation Algorithm Chemical kinetics Gillespie algorithm Statistics Stochastic processes Mathematics

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