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De Bruijn sequence
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1	CAREER: ABI: Scaling and Improving de Bruijn graph assembly C. Titus Brown Monday, July 25th, 2011 Keywords: assembly, bioinformatics, next generation sequencing, metagenomics, transcriptomics, mRNAseq. Add to Reading List Source URL: ged.msu.edu Language: English - Date: 2011-12-30 18:05:57 Biology Molecular biology Genetics Bioinformatics DNA sequencing Genomics Biotechnology De novo transcriptome assembly Sequence assembly Metagenomics RNA-Seq Whole genome sequencing
2	The Search and Construction of Nonlinear Feedback Shift Registers Add to Reading List Source URL: www.math.uni-magdeburg.de Language: English - Date: 2013-08-14 05:43:02 Stream ciphers Nonlinear feedback shift register Radio-frequency identification De Bruijn sequence De Bruijn Linear-feedback shift register Nicolaas Govert de Bruijn Nonlinear system
3	December 16th, 2011 Dear Editors, We would like the editors to consider our manuscript entitled “Scaling metagenome sequence assembly with probabilistic de Bruijn graphs” for publication in the Proceedings of the Nat Add to Reading List Source URL: ged.msu.edu Language: English - Date: 2011-12-30 18:05:57 Bioinformatics Environmental microbiology Genomics Molecular biology Metagenomics Sequence assembly DNA sequencing
4	Questions on Iqbal et alNature Genetics 44:De novo assembly and genotyping of variants using colored de Bruijn graphs. 1. What where the practical challenges that prompted this paper? What are some of th Add to Reading List Source URL: genome.sph.umich.edu Language: English - Date: 2014-10-26 19:29:42 Bioinformatics Biology Academia Genetics Genotyping Sequence assembly De Bruijn Algorithm DNA read errors De novo transcriptome assembly
5	Solution sheet High Throughput Sequencing Methods Bioinformatics Leipzig WS 13/14 Solution sheet Add to Reading List Source URL: www.bioinf.uni-leipzig.de Language: English - Date: 2014-01-08 11:43:46 Suffix tree Suffix array Burrows–Wheeler transform Substring Eulerian path Subsequence De Bruijn Sequence assembly Mathematics Mathematical analysis Computing
6	IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler Yu Peng, Henry C.M. Leung, S.M. Yiu, Francis Y.L. Chin Department of Computer Science, The University of Hong Kong Pokfulam Road, Hong Kong {ypeng, cmleung2, Add to Reading List Source URL: i.cs.hku.hk Language: English - Date: 2010-10-15 06:44:36 Graph theory Genomics Molecular biology DNA sequencing Velvet assembler Contig Connectivity Degree Sequence assembly Bioinformatics Mathematics Biology
7	Evolutionary Construction of de Bruijn Sequences ∗ Meltem S¨ onmez Turan National Institute of Standards and Technology, Computer Security Division Add to Reading List Source URL: eprint.iacr.org Language: English - Date: 2011-12-30 14:45:08 De Bruijn sequence Travelling salesman problem Genetic algorithm De Bruijn Mutation Bruijn Koorde Mathematics Combinatorics Graph theory
8	Computing k-th Lyndon Word and Decoding Lexicographically Minimal de Bruijn Sequence Tomasz Kociumaka, Jakub Radoszewski, Wojciech Rytter University of Warsaw Add to Reading List Source URL: www.cs.ucr.edu Language: English - Date: 2014-06-14 17:58:40 Combinatorics on words Enumerative combinatorics Lyndon word De Bruijn sequence Sequence De Bruijn Combinatorics Mathematics Discrete mathematics
9	A Quick Guide to Velvet and Oases VELVET is a simple yet efficient genomic denovo assembler based on de Bruijn graphs, taking advantage of short and longer reads as well. This widely used package in Next Generation Seque Add to Reading List Source URL: www.embnet.org Language: English - Date: 2014-06-09 12:22:32 Molecular biology Gene expression RNA DNA sequencing Velvet assembler FASTQ format Sequence assembly Contig RNA-Seq Biology Bioinformatics Science
10	PDF Document Add to Reading List Source URL: www.medicine-science.net23.net Language: English - Date: 2013-02-01 02:02:16 Eulerian path Minor Connectivity Graph De Bruijn graph Matroid theory Koorde De Bruijn sequence Graph theory Bioinformatics Sequence assembly