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Results: 49

#	Item
21	Rapid Computation of Distance Estimators from Nucleotide and Amino Acid Alignments M. Simonsen C. N. S. Pedersen Add to Reading List Source URL: users-birc.au.dk Language: English - Date: 2011-04-11 06:03:44 Biology Sequence alignment Nucleic acid sequence Multiple sequence alignment Substitution model Phylo BLOSUM SIMD SSE2 Computational phylogenetics Bioinformatics Science
22	G:rnalsInfoinfoissue164.dvi Add to Reading List Source URL: www.rpgroup.caltech.edu Language: English - Date: 2009-05-31 11:23:23 Computational phylogenetics Protein methods Matrices Biostatistics Protein structure Sequence alignment Substitution matrix Structural alignment BLOSUM Bioinformatics Biology Science
23	Comparing Kernels For Predicting Protein Binding Sites From Amino Acid Sequence Feihong Wu1,2,5,7 , Byron Olson6,8 , Drena Dobbs3,4,5,6,9 and Vasant Honavar1,2,4,5,6,10 Abstract— The ability to identify protein binding Add to Reading List Source URL: www.cs.iastate.edu Language: English - Date: 2006-05-28 21:12:24 Science Chemistry Protein structure Matrices DNA Sequence alignment Substitution matrix BLOSUM Multiple sequence alignment Bioinformatics Biology Computational phylogenetics
24	Pairwise Sequence Alignments Patrick Aboyoun Gentleman Lab Fred Hutchinson Cancer Research Center Seattle, WA April 16, 2015 Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-04-16 22:10:00 Computational science Sequence alignment Smith–Waterman algorithm Substitution matrix Gap penalty Needleman–Wunsch algorithm BLOSUM Point accepted mutation Alignment Bioinformatics Computational phylogenetics Science
25	Microsoft Word - camera.doc Add to Reading List Source URL: www.engineeringletters.com Language: English - Date: 2008-08-18 02:03:10 BLAST Smith–Waterman algorithm Sequence alignment Needleman–Wunsch algorithm FASTA Sequence analysis Dynamic programming Phylo BLOSUM Science Computational phylogenetics Bioinformatics
26	"Selecting the Right Similarity-Scoring Matrix". In: Current Protocols in Bioinformatics Add to Reading List Source URL: faculty.virginia.edu Language: English - Date: 2014-05-12 09:11:44 Science Sequence alignment BLOSUM Smith–Waterman algorithm FASTA BLAST Substitution model Matrix Nucleic acid sequence Bioinformatics Computational phylogenetics Biology
27	Gathering Sequences: BLAST PRVA_MACFU PRVA_HUMAN PRVA_GERSP PRVA_MOUSE Add to Reading List Source URL: www.tcoffee.org Language: English - Date: 2009-10-25 19:29:52 Biology Sequence alignment Multiple sequence alignment BLAST BLOSUM Clustal Homology Computational phylogenetics Bioinformatics Science
28	Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis Add to Reading List Source URL: molevol.cmima.csic.es Language: English - Date: 2008-08-20 11:05:11 Biology Genetics Sequence alignment BLOSUM Substitution matrix Phylogenetic tree Conserved sequence Phylo Nucleic acid sequence Bioinformatics Computational phylogenetics Science
29	Study Guide for Nov. 21 Exam in Bioinformatics I 1. Write a brief essay on the UCSC Human Genome Browser, Ensemble, and NCBI’s human genome resources. What kinds of questions can be answered by using them? Which sites Add to Reading List Source URL: globin.cse.psu.edu Language: English - Date: 2002-11-14 13:18:23 Computational phylogenetics Genetics Matrices BLAST Public domain software BLOSUM Human genome Science Bioinformatics Biology
30	Amino Acid Substitution Scores Consider the problem of scoring a region of an amino-acid alignment that contains no gaps, such as: GSAQVKGH GNPKVKAH Here we discuss standard ways of assigning a score to each amino acid p Add to Reading List Source URL: globin.cse.psu.edu Language: English - Date: 2002-10-31 14:08:53 Biology Matrices Genetics BLOSUM Point accepted mutation BLAST Substitution matrix Matrix Sequence alignment Bioinformatics Science Computational phylogenetics

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