LocusTrack: Integrated visualization of GWAS results and genomic annotation

First Page		Document Content
Biological databases Genomics Genetic epidemiology UCSC Genome Browser Genome browser Genome-wide association study Single-nucleotide polymorphism Ensembl International HapMap Project Bioinformatics Science Genetics		LocusTrack: Integrated visualization of GWAS results and genomic annotation Add to Reading List Source URL: www.scfbm.org Download Document from Source Website File Size: 691,12 KB Share Document on Facebook

	Exercise - Orthologues, paralogues and gene trees for the sup45 gene in yeast. a) How many orthologues are predicted for this gene in Ensembl Fungi? Let’s have a closer look at the orthologues in Schizosacchmomycetale DocID: 1vkaV - View Document
	Exercise – Ensembl Fungi: export sequences in FASTA format Retrieve the fasta sequences of all genes in Schistosoma mansoni located on chromosome 5 that are protein coding and contain transmembrane domains only. Do a DocID: 1vbN9 - View Document
	The 1000 Genomes Pilot Browser Tutorial _http://1000genomes.org/_ Updated onTo facilitate immediate analysis of the 1000 Genomes data by the whole scientific community, the Ensembl genome browser was adopte DocID: 1v2YJ - View Document
	Exercise – Ensembl Fungi: variation data in the S. cerevisiae mitochondrial genome Retrieve the variation ID, chromosome name, position in bp and alleles for all sequence variants in the mtDNA. Export the results as a DocID: 1upYE - View Document
	Exercise – Plasmodium falciparum and SNPs Go to Ensembl Protists and search for glucose-6-phosphate 1-dehydrogenase. Filter the results for Plasmodium falciparum only. a) How is this gene named in Ensembl Protists? DocID: 1un8t - View Document