PFP: A Computational Framework for Phylogenetic Footprinting in Prokaryotic Genomes Dongsheng Che1,2 , Guojun Li1 , Shane T. Jensen3 , Jun S. Liu4 , and Ying Xu1 1 Computational Systems Biology Laboratory,

Source URL: www-stat.wharton.upenn.edu

• Biology
• Gene expression
• Bioinformatics
• Genomics
• Operon
• Biological databases
• Phylogenetic footprinting
• Ridge
• DNA binding site
• Gene
• Conserved sequence
• Fis

Supplementary materials for this article are available online. Please go to www.tandfonline.com/r/JASA Statistical Learning With Time Series Dependence: An Application to Scoring Sleep in Mice Blakeley B. MCSHANE, Shane

Source URL: www-stat.wharton.upenn.edu

• Markov models
• Probability
• Mathematical analysis
• Markov chain
• Sleep
• Memorylessness
• Rapid eye movement sleep
• Stochastic matrix
• Forwardbackward algorithm
• Joint probability distribution
• Non-rapid eye movement sleep
• Expected value

The Impact of Switching to a Rapid Release Cycle on the Integration Delay of Addressed Issues An Empirical Study of the Mozilla Firefox Project Daniel Alencar da Costa1 , Shane McIntosh2 , Uirá Kulesza1 , Ahmed E. Hassa

Source URL: sail.cs.queensu.ca

• Cloud clients
• Portable software
• Firefox
• Mozilla
• Linux kernel
• Google Chrome
• Software versioning
• Kernel
• Agile software development

Photo by Shane Tucker FOSSIL DIG 2016 Don’t miss this opportunity to experience a fossil dig near Ashfall Fossil Beds. Excavation near Ashfall Fossil BedsReservation Form

Source URL: ashfall.unl.edu

Explaining BGP Slow Table Transfers: Implementing a TCP Delay Analyzer Technical Report #UCLA Computer Science Department Sep, 2011 Pei-chun Cheng∗ , Jong Han Park ∗ , Keyur Patel † , Shane Amante ‡ , Lixi

Source URL: fmdb.cs.ucla.edu

• Internet protocols
• Network performance
• Internet Standards
• Routing protocols
• Data transmission
• Border Gateway Protocol
• Transmission Control Protocol
• Packet loss
• TCP congestion control
• Router
• Retransmission
• Network congestion

IEEE TRANSACTIONS ON AUTONOMOUS MENTAL DEVELOPMENT A Behavior–Grounded Approach to Forming Object Categories: Separating Containers from Non-Containers Shane Griffith, Jivko Sinapov, Vladimir Sukhoy, and Alexander Sto

Source URL: www.prism.gatech.edu

An Empirical Study of Goto in C Code from GitHub Repositories Meiyappan Nagappan1 , Romain Robbes2 , Yasutaka Kamei3 , Éric Tanter2 , Shane McIntosh4 , Audris Mockus5 , Ahmed E. Hassan6 1

Source URL: www.se.rit.edu

• Software engineering
• Computer programming
• Computing
• Edsger W. Dijkstra
• Control flow
• Source code
• Goto
• Structured programming
• Label
• Spaghetti code
• Statement
• Considered harmful

Stat Biosci:206–224 DOIs12561Disease Diagnosis from Immunoassays with Plate to Plate Variability: A Hierarchical Bayesian Approach Oliver A. Entine · Dylan S. Small · Shane T. Jensen ·

Source URL: www-stat.wharton.upenn.edu

• Probability distributions
• Bayesian statistics
• Beta distribution
• Summary statistics
• Mixture model
• Normal distribution
• Prior probability
• Likelihood function
• Mode

The Evolution of ANT Build Systems Shane McIntosh, Bram Adams and Ahmed E. Hassan Software Analysis and Intelligence Lab (SAIL) School of Computing, Queen’s University, Canada {mcintosh, bram, ahmed}@cs.queensu.ca

Source URL: sail.cs.queensu.ca

• Build automation
• Compiling tools
• Apache Ant
• Source lines of code
• Apache Tomcat
• Software build
• Apache Maven
• JBoss
• WildFly
• Software metric
• Make
• GNU Build System