RNA-Seq

Results: 688



#Item
121Bioinformatics / Workflow / Galaxy / Chip-sequencing / Geneious / RNA-Seq / Bioinformatics workflow management systems / Scientific workflow system / Workflow technology / Biology / Science

Unipro UGENE NGS pipelines and components for variant calling, RNA-seq and ChIP-seq data analyses Olga Golosova1 , Ross Henderson2 , Yuriy Vaskin1 , Andrei Gabrielian2 , German Grekhov1 , Vijayaraj Nagarajan2 , Andrew J.

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Source URL: peerj.com

Language: English - Date: 2014-10-31 08:10:48
122Gene expression / Microarrays / DNA / RNA / Real-time polymerase chain reaction / DNA microarray / Housekeeping gene / RNA-Seq / Gene / Biology / Biochemistry / Molecular biology

http://genomebiology.comresearchResearch Jo Vandesompele, Katleen De Preter, Filip Pattyn, Bruce Poppe, Nadine Van Roy, Anne De Paepe and Frank Speleman

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Source URL: www.genomebiology.com

Language: English
123Microarrays / Gene expression / Bioinformatics / RNA / RNA-Seq / MA plot / Gene expression profiling / FASTQ format / Gene / Biology / Biochemistry / Molecular biology

It’s DE-licious: a recipe for differential expression analyses of RNA-seq experiments using quasi-likelihood methods in edgeR Aaron T. L. Lun1,2 Yunshun Chen1,2

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Source URL: www.statsci.org

Language: English - Date: 2015-04-07 19:58:53
124Genomics / DNA sequencing / Gene expression / Protein methods / Full genome sequencing / Chip-sequencing / Illumina / RNA-Seq / Nanopore sequencing / Biology / Genetics / Molecular biology

Final Agenda Cambridge Healthtech Institute and NGS Leaders’ Fourth Annual March 18-20, 2013

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Source URL: www.giievent.jp

Language: English - Date: 2012-12-19 23:15:13
125Genomics / DNA sequencing / Gene expression / Protein methods / Full genome sequencing / Chip-sequencing / Illumina / RNA-Seq / Nanopore sequencing / Biology / Genetics / Molecular biology

Final Agenda Cambridge Healthtech Institute and NGS Leaders’ Fourth Annual March 18-20, 2013

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Source URL: www.giievent.kr

Language: English - Date: 2012-12-21 04:38:16
126DNA / RNA splicing / Spliceosome / Gene expression / Molecular biology / Exon / Intron / Gene / Vector space / Algebra / Biology / Genetics

Package ‘csaw’ May 23, 2015 VersionDateTitle ChIP-seq analysis with windows Author Aaron Lun <>, Gordon Smyth <>

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Source URL: bioconductor.org

Language: English - Date: 2015-05-29 13:53:41
127Genomics / Biological databases / Gene expression / UCSC Genome Browser / RNA-Seq / Genome browser / Gene / Expressed sequence tag / Ensembl / Biology / Bioinformatics / Genetics

PDF Document

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Source URL: bioconductor.org

Language: English - Date: 2015-05-28 21:21:35
128Graph / Bipartite graph / De novo transcriptome assembly / Connectivity / Graph theory / Mathematics / Matching

SUPPLEMENTARY MATERIAL FOR THE PAPER Bridger: A new framework for de novo transcriptome assembly using RNA-seq data Zheng Chang1,†, Guojun Li1,†,*, Juntao Liu1, Yu Zhang6, Cody Ashby4,5, Deli Liu2,3, Carole L. Cramer

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Source URL: genomebiology.com

Language: English
129Molecular biology / Gene expression / RNA / Medicago truncatula / Gene prediction / Pseudogene / Gene / Expressed sequence tag / RNA-Seq / Biology / Genetics / Genomics

Research © 2012 by The American Society for Biochemistry and Molecular Biology, Inc. This paper is available on line at http://www.mcponline.org A Proteogenomic Survey of the Medicago truncatula Genome*□

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Source URL: www.mcponline.org

Language: English
130Gene expression / Microarrays / DNA / Bioinformatics / DNA microarray / RNA-Seq / Complementary DNA / Library / Gene / Biology / Molecular biology / Biochemistry

Get into Genes: Teacher Copy Paper Microarrays An interactive way to visualize how microarrays are used to study gene expression in Australian agriculture

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Source URL: www.getintogenes.com

Language: English - Date: 2014-04-16 00:17:47
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