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Phylogenetics
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121	Computer-Assisted Methods of Stemmatic Analysis Robert O’Hara and Peter Robinson In this essay, we review the methods of computer-assisted stemmatic analysis available to the Canterbury Tales Project.1 Our belief that Add to Reading List Source URL: rjohara.net Language: English - Date: 2015-12-06 18:49:39 Phylogenetics Textual scholarship Philosophy of biology Evolutionary biology Papyrology Textual criticism Cladistics Stemma Cladogram Clade Phylogenetic tree The Canterbury Tales
122	Adaptive Request Scheduling for Parallel Scientific Web Services Add to Reading List Source URL: i.cs.hku.hk Language: English - Date: 2008-07-13 12:43:16 Parallel computing Computational phylogenetics BLAST Public-domain software Bioinformatics Data-intensive computing Oak Ridge National Laboratory Computer cluster Sequence alignment
123	© 2004 Nature Publishing Group http://www.nature.com/naturebiotechnology _computational BIOLOGY PRIMER Add to Reading List Source URL: bioinfo.ict.ac.cn Language: English - Date: 2014-11-28 11:09:46 Bioinformatics Computational phylogenetics BLOSUM Sequence alignment BLAST FASTA Homology Position weight matrix Matrix Substitution matrix Multiple sequence alignment
124	c Birkh¨auser Verlag, Basel, 2004 Annals of Combinatorics Annals of Combinatorics Add to Reading List Source URL: community.dur.ac.uk Language: English - Date: 2006-01-18 08:13:19 Knowledge representation Binary trees Agreement forest Tree Phylogenetics Parallel Tree Contraction
125	Clustering of Main Orthologs for Multiple Genomes Zheng Fu and Tao Jiang Contact email: {zfu, jiang}@cs.ucr.edu Department of Computer Science and Engineering University of California, Riverside, CA Add to Reading List Source URL: msoar.cs.ucr.edu Language: English - Date: 2009-07-31 21:58:37 Genomics Biological databases Phylogenetics Evolutionary biology Genetic mapping Homology Human genome Inparanoid PANTHER TreeFam Genome Comparative genomics
126	Patterns of bird invasion are consistent with environmental filtering Add to Reading List Source URL: www.owlnet.rice.edu Language: English - Date: 2012-08-08 17:13:26 Phylogenetics Phylogenetic tree Bird Introduced species Invasive species
127	Genome Informatics 13: 61–Extraction of Organism Groups from Phylogenetic Profiles Using Independent Component Analysis Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2002-12-09 05:53:38 Multivariate statistics Phylogenetics Molecular biology Biological databases Genetics Independent component analysis KEGG Factor analysis Principal component analysis Homology Bioinformatics Organism
128	ORIGINAL RESEARCH A Reduction Algorithm for Computing The Hybridization Number of Two Trees Magnus Bordewich 1, Simone Linz 2,3, Katherine St. John 4 and Charles Semple 2 1 Add to Reading List Source URL: community.dur.ac.uk Language: English - Date: 2007-10-30 12:27:15 Phylogenetics Knowledge representation Data types Phylogenetic network Agreement forest Tree Phylogenetic tree Reticulate evolution Bioinformatics Binary trees
129	How to Compute a Large Tree (with or without an alignment) This talk •  Part 1: How to get a good alignment •  Part 2: How to get a good tree from a good Add to Reading List Source URL: tandy.cs.illinois.edu Language: English - Date: 2016-08-02 03:01:56 Computational phylogenetics Bioinformatics Sequence alignment Multiple sequence alignment MUSCLE Alignment Clustal Transcriptome
130	Journalof Ecology1995, 83, FORUM Add to Reading List Source URL: www.journalofecology.org Language: English - Date: 2016-04-07 07:04:57 Phylogenetics Phylogenetic tree Species Phylogenetic comparative methods

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