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Metagenomics
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11	Csaba Kerepesi, Dániel Bánky, Vince Grolmusz: AmphoraNet: Taxonomic Composition Analysis of Metagenomic Shotgun Sequencing Data http://pitgroup.org/amphoranet/ Add to Reading List Source URL: pitgroup.org Language: English - Date: 2014-01-08 03:45:08 Biology Microbiology Bioinformatics Bacteriology Environmental microbiology Genomics Human Microbiome Project Human microbiota AMPHORA Microbiota Metagenomics MEGAN
12	CAREER: ABI: Scaling and Improving de Bruijn graph assembly C. Titus Brown Monday, July 25th, 2011 Keywords: assembly, bioinformatics, next generation sequencing, metagenomics, transcriptomics, mRNAseq. Add to Reading List Source URL: ged.msu.edu Language: English - Date: 2011-12-30 18:05:57 Biology Molecular biology Genetics Bioinformatics DNA sequencing Genomics Biotechnology De novo transcriptome assembly Sequence assembly Metagenomics RNA-Seq Whole genome sequencing
13	Microbial Source Tracking Add to Reading List Source URL: www.tetratech-ffx.com Language: English - Date: 2006-12-08 15:35:39 Biology Microbiology Bacteria Molecular biology Laboratory techniques Environmental microbiology Bacteroidetes Biotechnology Bacteroides Polymerase chain reaction Gut flora Metagenomics
14	How can metagenomics be used to address ques3ons in ecology? Jay T. Lennon Indiana University Metagenomics is a tool Add to Reading List Source URL: www.terragenome.org Language: English - Date: 2013-06-05 12:19:04 Genomics Biology Bioinformatics Environmental microbiology Genetics Metagenomics Omics Genome
15	First steps towards automated metagenomic assembly Mihai Pop Sergey Koren Dan Sommer University of Maryland, College Park This presentation is licensed under the Creative Commons Attribution 3.0 Unported License Add to Reading List Source URL: hmpdacc.org Language: English - Date: 2014-02-26 12:33:40 Biology Bioinformatics Genetics Genomics Sequence assembly Metagenomics Genome Foolishness Hybrid genome assembly
16	warnow-3problems-2015-final.pdf Add to Reading List Source URL: tandy.cs.illinois.edu Language: English - Date: 2016-01-12 16:19:54 Bioinformatics Biology Metagenomics Phylogenomics Phylogenetics Ensembl Gene
17	HMP UH2 Random Forest Top Features and Box Plots Add to Reading List Source URL: hmpdacc.org Language: English - Date: 2014-02-26 12:33:40 Software System software Biology Environmental microbiology Microbiology Bioinformatics AmigaOS Genomics Workbench Metagenomics Microbiota
18	Package ‘phyloseq’ August 18, 2016 VersionDateTitle Handling and analysis of high-throughput microbiome census data Description phyloseq provides a set of classes and tools Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2016-08-21 17:15:37 Biology Microbiology Clinical pathology Environmental microbiology Genomics Bioinformatics Metagenomics Microbiota Human microbiota Operational taxonomic unit DNA sequencing UniFrac
19	Microbiome This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. VizBin - an application for reference-independent Add to Reading List Source URL: lvdmaaten.github.io Language: English - Date: 2016-07-16 15:30:43 Biology Microbiology Bioinformatics Clinical pathology Environmental microbiology Molecular biology Bacteriology Binning Metagenomics Human Microbiome Project Microbiota Shotgun sequencing
20	Workflow for processing high throughput Single Molecule Real-Time sequencing data, for analyzing the microbiome of patients undergoing fecal microbiota transplantation Add to Reading List Source URL: www.pacb.com Language: English - Date: 2016-06-29 16:14:28 Biology Molecular biology DNA sequencing Microbiology Bioinformatics Genomics Pacific Biosciences Microbiota MEGAN Human microbiota Shotgun sequencing Metagenomics