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Chromatin
Results: 710

#	Item
551	BIOINFORMATICS ORIGINAL PAPER Genome analysis Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2012-03-01 15:47:27 Molecular biology Gene expression Bioinformatics Transcription factors Chip-sequencing ChIP-on-chip CTCF DNA binding site Chromatin immunoprecipitation Biology Biochemistry Protein methods
552	MARIS: Method for Analyzing RNA following Intracellular Sorting Sinisˇa Hrvatin1, Francis Deng1, Charles W. O’Donnell1,2, David K. Gifford2, Douglas A. Melton1,3* 1 The Harvard Department of Stem Cell and Regenerative Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2014-05-21 15:11:47 Chemistry RNA Gene expression Laboratory techniques Transcriptome RNA-Seq Reverse transcription polymerase chain reaction Cell biology Chromatin immunoprecipitation Biology Biochemistry Molecular biology
553	A n a ly s i s Discovery of directional and nondirectional pioneer transcription factors by modeling DNase profile magnitude and shape Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2014-05-21 15:52:05 Molecular genetics DNA Protein methods Chip-sequencing DNA binding site Chromatin immunoprecipitation Hypersensitive site DNase-Seq Chromatin Biology Transcription factors Gene expression
554	a r t ic l e s Saltatory remodeling of Hox chromatin in response to rostrocaudal patterning signals npg Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2013-12-12 11:20:25 Genes Proteins Gene expression Hox gene GDF11 Neural development Homeobox CDX2 Retinoic acid Biology Developmental biology Transcription factors
555	High Resolution Genome Wide Binding Event Finding and Motif Discovery Reveals Transcription Factor Spatial Binding Constraints Yuchun Guo1,2, Shaun Mahony2, David K. Gifford2 1 Computational and Systems Biology Program Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2013-04-10 11:39:36 Transcription factors Molecular biology Protein methods Bioinformatics DNA binding site Chip-sequencing CTCF Sequence motif Chromatin immunoprecipitation Biology Biochemistry Gene expression
556	High-resolution computational models of genome binding events Yuan Qi1∗ , Alex Rolfe1∗ , Kenzie D. MacIsaac1∗ , Georg K. Gerber1,2 , Dmitry Pokholok3 , Julia Zeitlinger3 , Timothy Danford1 , Robin D. Dowell1 , Erne Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2006-09-30 22:01:24 DNA Gene expression Protein methods Microarrays DNA binding site ChIP-on-chip DNA microarray Chromatin immunoprecipitation Regulation of gene expression Biology Biochemistry Bioinformatics
557	SEE COMMENTARY Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast Stacie L. Bumgarnera, Robin D. Dowellb, Paula Grisafia, David K. Giffordb,1, and Gerald R. Finka,1 aWhitehead I Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2010-05-19 16:04:53 RNA Molecular biology Molecular genetics Long non-coding RNA Non-coding RNA Transcription Promoter RNA polymerase Chromatin Biology Genetics Gene expression
558	Molecular Cell, Vol. 16, 199–209, October 22, 2004, Copyright 2004 by Cell Press Global Position and Recruitment of HATs and HDACs in the Yeast Genome Franc¸ois Robert,1,5,6,* Dmitry K. Pokholok,1,5 Nancy M. Hanne Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2010-05-20 10:42:15 Epigenetics Transcription factors Molecular genetics Ridge Histone deacetylase Histone acetyltransferase Chromatin Nucleosome Regulation of gene expression Biology Genetics Gene expression
559	brief communications © 2011 Nature America, Inc. All rights reserved. Embryonic stem cell–based mapping of developmental Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English - Date: 2012-03-01 16:31:46 Transcription factors Protein methods Gene expression DNA Chip-sequencing DNA binding site Chromatin immunoprecipitation Immunoprecipitation Hox gene Biology Biochemistry Molecular biology
560	An Integrated Model of Multiple-Condition ChIP-Seq Data Reveals Predeterminants of Cdx2 Binding Shaun Mahony1., Matthew D. Edwards2., Esteban O. Mazzoni3, Richard I. Sherwood4, Akshay Kakumanu1, Carolyn A. Morrison5, Hy Add to Reading List Source URL: www.psrg.csail.mit.edu Language: English* - Date: 2014-05-21 14:43:17 Molecular biology Epigenetics Gene expression Transcription factors Chip-sequencing Nucleosome Chromatin immunoprecipitation Biology Biochemistry Protein methods

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