CellProfiler

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1For this tutorial, we will be building a pipeline to find individual worms in subregions and then extract measurements. To begin, start CellProfiler 2.1. The CellProfiler interface consists of the pipeline panel to the l

For this tutorial, we will be building a pipeline to find individual worms in subregions and then extract measurements. To begin, start CellProfiler 2.1. The CellProfiler interface consists of the pipeline panel to the l

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- Date: 2016-01-25 15:37:29
    2How  to  get  started  with  the  WormToolbox   The  WormToolbox  is  a  set  of  CellProfiler  modules  specific  for  worm  analysis  that  are  used  i

    How  to  get  started  with  the  WormToolbox   The  WormToolbox  is  a  set  of  CellProfiler  modules  specific  for  worm  analysis  that  are  used  i

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    - Date: 2016-02-09 11:46:00
      3Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images UNIT 14.17

      Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images UNIT 14.17

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      - Date: 2016-02-09 11:44:13
        4Input Module Tutorial #1: Using the Images Module This tutorial describes how to use the Images module for preparing images for processing in CellProfiler. Setting this module correctly is the first step in creating a ne

        Input Module Tutorial #1: Using the Images Module This tutorial describes how to use the Images module for preparing images for processing in CellProfiler. Setting this module correctly is the first step in creating a ne

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        - Date: 2016-01-25 15:27:45
          5Hello and welcome to CellProfiler. In this short movie, I will demonstrate the basics of using our software, from starting CellProfiler, opening images, changing directories, loading, creating, and saving pipelines, and

          Hello and welcome to CellProfiler. In this short movie, I will demonstrate the basics of using our software, from starting CellProfiler, opening images, changing directories, loading, creating, and saving pipelines, and

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          - Date: 2016-01-25 15:37:25
            6Short Technical Reports CellProfiler™: free, versatile software for automated biological image analysis Michael R. Lamprecht1, David M. Sabatini1,2, and Anne E. Carpenter1 1Whitehead

            Short Technical Reports CellProfiler™: free, versatile software for automated biological image analysis Michael R. Lamprecht1, David M. Sabatini1,2, and Anne E. Carpenter1 1Whitehead

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            - Date: 2016-02-08 14:22:32
              7Image-based screening using subcellular localization of FOXO1A in osteosarcoma cells: A computer exercise using CellProfiler & CellProfiler Analyst software Carolina Wählby, Martin Simonsson, Megan Rokop and Mark Bray,

              Image-based screening using subcellular localization of FOXO1A in osteosarcoma cells: A computer exercise using CellProfiler & CellProfiler Analyst software Carolina Wählby, Martin Simonsson, Megan Rokop and Mark Bray,

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              - Date: 2016-01-25 15:36:53
                8Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images UNIT 14.17

                Using CellProfiler for Automatic Identification and Measurement of Biological Objects in Images UNIT 14.17

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                Language: English - Date: 2016-01-25 15:28:57
                9Discovering drugs by using mixed cell cultures Mark­Anthony Bray, David Logan and Anne Carpenter    Background The problem

                Discovering drugs by using mixed cell cultures Mark­Anthony Bray, David Logan and Anne Carpenter    Background The problem

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                Language: English - Date: 2016-02-08 14:46:14
                10Hopefully you’ve already seen the introductory demo, Exploring Image data, which covers some of the basics of CPA. Here, I will demonstrate the classify feature of CellProfiler Analyst, which scores complex and subtle

                Hopefully you’ve already seen the introductory demo, Exploring Image data, which covers some of the basics of CPA. Here, I will demonstrate the classify feature of CellProfiler Analyst, which scores complex and subtle

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                Language: English - Date: 2016-01-25 15:50:20