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Bioconductor
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#	Item
311	BrowserViz Paul Shannon April 9, 2015 Contents 1 Introduction Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-04-17 01:32:56 World Wide Web JavaScript Web development Cross-platform software JSON WebSocket Comparison of server-side JavaScript solutions Comet Computing Ajax Software
312	Using R and Bioconductor for proteomics data analysis L. Gatto ∗,1 2 Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-04-15 12:48:48 Proteomics Science Bioinformatics Isobaric tag for relative and absolute quantitation Isobaric labeling OpenMS Stable isotope labeling by amino acids in cell culture Mass spectrometry data format PEAKS Chemistry Mass spectrometry Laboratory techniques
313	Pairwise Sequence Alignments Patrick Aboyoun Gentleman Lab Fred Hutchinson Cancer Research Center Seattle, WA April 16, 2015 Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-04-16 22:10:00 Computational science Sequence alignment Smith–Waterman algorithm Substitution matrix Gap penalty Needleman–Wunsch algorithm BLOSUM Point accepted mutation Alignment Bioinformatics Computational phylogenetics Science
314	Open Access et al. Chu 2008 Volume Add to Reading List Source URL: www.stat.washington.edu Language: English - Date: 2010-06-07 16:58:41 Bioconductor Bioinformatics Software Application software Science
315	A current perspective on using R and Bioconductor for proteomics data analysis 1,3 S. Gibb 1 Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-03-28 11:18:46 Software Bioinformatics Proteomics Bioconductor Isobaric tag for relative and absolute quantitation OpenMS Mass spectrometry data format Metabolomics R Science Chemistry Mass spectrometry
316	1 Open Science in Machine Learning Mikio L. Braun TU Berlin Cheng Soon Ong National ICT Australia Add to Reading List Source URL: www.ong-home.my Language: English - Date: 2013-12-12 02:50:01 Application software Bioconductor Open-source software Supervised learning Open source Open data Semi-supervised learning Proprietary software Data mining Machine learning Science Software
317	R / Bioconductor for Integrative Genomic Analysis Martin Morgan ([removed]) Fred Hutchinson Cancer Research Center 15 January 2015 Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-01-20 18:02:08 Molecular biology Bioinformatics Bioconductor Microarrays Gene expression Lumi Protein methods RNA-Seq R Science Software Biology
318	A quick introduction to GRanges and GRangesList objects Herv´ e Pag` es [removed] Fred Hutchinson Cancer Research Center Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-04-07 11:13:43 Linear algebra Genomics Euclidean vector Vector calculus Vector space Granges Switzerland Genome Algebra Mathematics Abstract algebra
319	The Bioconductor Project for Reproducible Analysis of High Throughput Genomic Data Martin Morgan ([removed]) Fred Hutchinson Cancer Research Center Seattle, WA, USA Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-01-20 18:02:08 Bioinformatics Bioconductor R Genomics Software Application software Science
320	The Biostrings 2 classes (work in progress) Herv´e Pag`es April 16, 2015 Contents 1 Introduction Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-04-16 22:10:00 Procedural programming languages Cross-platform software GNUstep NeXT Objective-C C Software engineering Computing Computer programming

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