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271	An Overview of Projects in Computing for Genomic Analysis Biocore Technical Report 1 Bioconductor Core November 30, 2002 Accompanying the proliferation of genomic data have been many different software tools and initiat Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2010-07-21 16:53:20 Bioinformatics Bioconductor Affymetrix DNA microarray Protein microarray R Gene expression profiling Cluster analysis Microarray analysis techniques Microarrays Science Biology
272	Bioconductor: Assessment of Current Progress Biocore Technical Report 2 Bioconductor Core November 30, 2002 This report reviews current developments in Bioconductor, including low-level microarray analysis tools, contri Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2010-07-21 16:53:20 Bioinformatics Biochemistry Gene expression DNA Molecular biology Bioconductor DNA microarray Gene expression profiling Affymetrix Microarrays Biology Science
273	Package ‘IRanges’ May 7, 2015 Title Infrastructure for manipulating intervals on sequences Description The package provides efficient low-level and highly reusable S4 classes for storing ranges of integers, RLE vecto Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2015-05-10 12:15:08 Abstract algebra Vectors Vector calculus Euclidean vector Vector space Vector Constructor Matrix Derivative Algebra Mathematics Linear algebra
274	A joint newsletter of the Statistical Computing & Statistical Graphics Sections of the American Statistical Association. Add to Reading List Source URL: stat-computing.org Language: English - Date: 2013-06-10 13:45:38 Bootstrapping Resampling Confidence interval Bioconductor Statistical hypothesis testing Computational statistics Maximum likelihood Statistics Science Statistical inference
275	Analysis of high-throughput short reads using R and BioConductor Patrick Aboyuon & Martin Morgan Fred Hutchinson Cancer Research Center Seattle, WASeptember, 2008 Add to Reading List Source URL: www.bioconductor.org Language: English - Date: 2008-09-10 15:36:27 Application software Microarrays DNA sequencing FASTQ format Bioconductor Lumi R Illumina FGED Society Science Software Bioinformatics
276	Introduction to GenomicFiles Valerie Obenchain, Michael Love, Martin Morgan Last modified: October 2014; Compiled: May 5, 2015 Contents 1 Introduction Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-05-05 23:09:46 Usenet Header file Portable Executable Computing Data management Parchive
277	An Introduction to ShortRead Martin Morgan Modified: 21 October, 2013. Compiled: April 16, 2015 > library("ShortRead") The ShortRead package provides functionality for working with FASTQ files from high throughput sequen Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-04-16 22:36:09 Science Computing FASTA format Phred quality score INP Quality assurance Comm Bioinformatics Biology FASTQ format
278	Biostrings Quick Overview Herv´e Pag`es Fred Hutchinson Cancer Research Center Seattle, WA April 16, 2015 Please note that most but not all the functionalities provided by the Biostrings package are listed in this docum Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-04-16 22:10:00 Molecular biology Sequence Nucleic acid sequence Vector Biology DNA Genetics
279	Program Director/Principal Investigator (Last, First, Middle): Danko, Charles, G. BIOGRAPHICAL SKETCH Provide the following information for the Senior/key personnel and other significant contributors in the order listed Add to Reading List Source URL: www.vet.cornell.edu Language: English - Date: 2014-10-03 12:26:47 Gene expression Software Computational biology Mathematical and theoretical biology Transcriptome Genomics Bioconductor Transcription Biology Science Bioinformatics
280	GenomicRanges HOWTOs Bioconductor Team Edited: July 2014; Compiled: April 22, 2015 Contents 1 Introduction Add to Reading List Source URL: bioconductor.org Language: English - Date: 2015-04-22 22:17:07 Bioinformatics Biological databases Genetics DNA sequencing Bioconductor Ensembl RNA-Seq UCSC Genome Browser Genome browser Biology Science Molecular biology

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