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| First Page | Document Content | |
|---|---|---|
 Date: 2013-02-13 06:44:50Computational science BioJava FASTA format FASTA Sequence alignment Smith–Waterman algorithm Trimming Bioinformatics Science Computational phylogenetics |
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ART-A software guide version 0.1 Daniel Struck 1 | Multiple sequence alignment with user-defined constraintsDocID: 1vdcP - View Document |
| Today’s Lecture • Multiple sequence alignment • Improved scoring of pairwise alignments – Affine gap penalties – ProfilesDocID: 1uPzd - View Document |
| Today’s Lecture • Finding multiple high-scoring segments • “D-segments” – relationship to 2-state HMMs • Sequence alignment & evolutionDocID: 1uG7I - View Document |
| Multiple Sequence Alignment: A Critical Comparison of Four Popular Programs Shirley Sutton, Biochemistry 218 Final Project, March 14, 2008 Introduction For both the computational biologist and the research biologist, theDocID: 1uprj - View Document |
| Handling Rearrangements in DNA Sequence Alignment Maneesh BhandDocID: 1ul0C - View Document |