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Mathematical and theoretical biology / Bioinformatics / Genomics / Pseudogene / Genome project / Arabidopsis thaliana / Gene prediction / Expressed sequence tag / Transcriptome / Biology / Genetics / Gene expression


Breakthrough Technologies MAKER-P: A Tool Kit for the Rapid Creation, Management, and Quality Control of Plant Genome Annotations1[W][OPEN] Michael S. Campbell, MeiYee Law, Carson Holt, Joshua C. Stein, Gaurav D. Moghe,
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Document Date: 2014-08-27 19:38:09


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File Size: 781,04 KB

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City

Austin / New York / Ithaca / Seq / Toronto / Ames / East Lansing / /

Company

H.S. K.L.C. / MAKER-P / Cold Spring Harbor Laboratory / /

Country

Canada / /

/

Event

FDA Phase / /

Facility

National Center / Plant Physiol / University of Utah / Ontario Institute / Plant Genomes Table I. Effects / Pseudogene pipeline / Plant Biologists / plant Utricularia / Michigan State University / Plant Genomes Figure / Plant Genomes / Iowa State University / Texas Advanced Computing Center / Mark Yandell* Eccles Institute of Human Genetics / University of Texas / Plant Biology / Plant PhysiologyÒ / /

IndustryTerm

Web addresses / iPlant infrastructure / throughput genome sequencing technology / online version / online databases / online documentation / iPlant compute infrastructure / basic protocol / downstream applications / http /

MarketIndex

MAKER / /

Organization

United States Department of Agriculture / Computing Center / Michigan State University / American Society of Plant Biologists / National Science Foundation / Department of Plant Biology / University of Utah / Salt Lake City / Department of Genetics / Development / and Cell Biology / Texas Advanced Computing Center / Iowa State University / Department of Computer Science and Engineering / Department of Horticulture / Robert W. Holley Center for Agriculture and Health / National Center for Biotechnology Information / Ontario Institute for Cancer Research / US Federal Reserve / Yanni Sun / Ning Jiang / and Mark Yandell* Eccles Institute of Human Genetics / Department of Biomedical Informatics / University of Texas / /

Person

Yanni Sun / Joshua C. Stein / Kevin L. Childs / Semi Hidden Markov / David E. Hufnagel / Max Augustus Trained / Michael S. Campbell / Shin-Han Shiu / Doreen Ware / Carolyn J. Lawrence / Gene Finders / Gaurav D. Moghe / Max Builds / Carson Holt / Gene-Level Accuracies / Ning Jiang / Dian Jiao / Mark Yandell / /

Position

using MITE-Hunter / D.J. / author / model / single investigator / representative / /

Product

Annotation Edit Distance / WebApollo / iPlant Cyberinfrastructure / Arabidopsis / S2 / /

ProgrammingLanguage

php / /

ProvinceOrState

Texas / New Jersey / New York / Michigan / Utah / South Carolina / Iowa / Ontario / /

PublishedMedium

Cancer Research / /

Technology

genomics / proteomics / bioinformatics / Biotechnology / high-throughput genome sequencing technology / two protocols / basic protocol / http / /

URL

www.plantphysiol.org / http /

SocialTag