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Company SOAP2 / / / Facility J. Craig Venter Institute / Case Western Reserve University / / IndustryTerm alignment searching algorithm / throughput sequencing technologies / depth-first search / biological applications / technology applications / alignment algorithms / suffix tree algorithms / alignment-scorebased search algorithm / alignment tools / search space / hash table algorithm / / Organization Science Center / Department of Medicine / Case Western Reserve University / Cleveland / Department of Pathology / J. Craig Venter Institute / Department of Epidemiology and Biostatistics / / Person Mark D / / / Position Corresponding author / / Technology alignment searching algorithm / Needleman-Wunsch algorithm / suffix tree algorithms / hash table algorithm / NGS technology / two alignment algorithms / FM-index algorithm / alignment-scorebased search algorithm / high-throughput sequencing technologies / four alignment algorithms / alignment algorithms / NGS technologies / simulation / human genome / / URL www.novocraft.com / http / SocialTag 
How do alignment programs perform on sequencing data with varying qualities and from repetitive regions? Xiaoqing Yu1, Kishore Guda2,3, Joseph Willis4, Martina Veigl2, Zhenghe Wang5, Sanford Markowitz3, Mark D. Adams5 an