Fitness landscape for nucleosome positioning Donate Weghorn and Michael Lässig1 Institute for Theoretical Physics, University of Cologne, 50937 Cologne, Germany Edited by José N. Onuchic, Rice University, Houston, TX,

Source URL: www.thp.uni-koeln.de

Supporting Information Weghorn and LässigpnasSI Text Null Distributions of Nucleosome Affinity and of Regulatory Site Content. Our inference of selection is based on a comparison of

Source URL: www.thp.uni-koeln.de

doi:nature04979 ARTICLES A genomic code for nucleosome positioning Eran Segal1, Yvonne Fondufe-Mittendorf2, Lingyi Chen2, AnnChristine Tha˚stro¨m2, Yair Field1, Irene K. Moore2,

Source URL: www.wisdom.weizmann.ac.il

REVIEWS Nature Reviews Cancer | AOP, published online 18 August 2011; doi:nrc3092 What does physics have to do with cancer?

Source URL: michorlab.dfci.harvard.edu

• Biology
• Genetics
• Molecular genetics
• Molecular biology
• Epigenetics
• Transcription factors
• Nucleosome
• Carcinogenesis
• Chromatin
• Cancer
• DNA
• Oncogenomics

Downloaded from genome.cshlp.org on September 4, Published by Cold Spring Harbor Laboratory Press Letter A high-resolution, nucleosome position map of C. elegans reveals a lack of universal

Source URL: mendel.stanford.edu

LETTER doi:nature10002 Determinants of nucleosome organization in primary human cells

Source URL: mendel.stanford.edu

Genome Informatics 16(2): 3–Qualitatively Predicting Acetylation and Methylation Areas in DNA Sequences

Source URL: www.jsbi.org

• Biology
• Epigenetics
• Proteins
• Molecular genetics
• Molecular biology
• Genetics
• Histone
• Nucleosome
• H3K4me3
• Acetylation
• Chromatin

Methods detecting DNA-Protein interactions ChIP Tricks and Tips UPSC- Technical Seminars Krisztina Ötvös

Source URL: postdoc.upsc.se

• Molecular genetics
• Molecular biology
• Protein methods
• Gene expression
• Genetics
• DNA-binding protein
• ProteinDNA interaction
• Chromatin immunoprecipitation
• Electrophoretic mobility shift assay
• Chromatin
• Transcription
• Nucleosome

Controls of Nucleosome Positioning in the Human Genome Daniel J. Gaffney 1,2,3.*, Graham McVicker 1,2.*, Athma A. Pai1, Yvonne N. Fondufe-Mittendorf4,5, Noah Lewellen1,2, Katelyn Michelini1,2, Jonathan Widom4{, Yoav Gila

Source URL: pritchardlab.stanford.edu

ARTICLES Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

Source URL: greenleaf.stanford.edu