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Downloaded from www.genome.org on April 14, [removed]Published by Cold Spring Harbor Laboratory Press MAKER: An easy-to-use annotation pipeline designed for emerging model organism genomes Brandi L. Cantarel, Ian Korf, So
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Document Date: 2013-04-12 17:01:39


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City

Salt Lake City / Besansky / St. Louis / Davis / Kyrpides / Louis / Ensembl / Sebastopol / /

Company

genome Ab / S. / O’Reilly & Associates Inc. / Cold Spring Harbor Laboratory Press / nGASP / mySQL / /

Country

United States / /

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Event

Business Partnership / /

Facility

Washington University Genome Sequencing Center / Eccles Institute of Human Genetics / University of Utah / University of Utah School / Hughes Medical Institute / Joint Genome Institute / /

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IndustryTerm

canonical splice site / http /

MarketIndex

MAKER / MAKER Quality / /

OperatingSystem

UNIX / Mac OS X / Linux / /

Organization

University of Utah School of Medicine / University of Utah / Salt Lake City / Cellular Biology and Genome Center / Hughes Medical Institute / Eccles Institute of Human Genetics / Joint Genome Institute / National Institute of Health / 4Howard Hughes Medical Institute / SNAP HMM / Washington University Genome Sequencing Center / /

Person

Bret Pearson / Eric Ross / Mark Yandell Genome Res / Sofia M.C. Robb / Genis Parra / Ian Korf / Augustus Maker Gramene Augustus / Carson Holt / Brandi L. Cantarel / Hariharan / Gramene / Lipman / Gabor Miklos / Barry Moore / /

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Position

Butler / sequence annotation editor / D.J. / investigator / Corresponding author / model / Marshall / /

Product

RepeatMasker / CAP3 / Muscle (Edgar 2004) / GFF3 / /

ProgrammingLanguage

XML / php / /

ProvinceOrState

Utah / California / New Jersey / North Carolina / /

PublishedMedium

Molecular and Cellular Biology / Genome Research / /

Technology

XML / RAM / Linux / second alignment algorithm / 2-GHz processors / laptop computer / stem cells / human genome / one processor / gene expression / splice-site aware alignment algorithm / genomics / bioinformatics / UNIX / two processors / cloning / aware Exonerate algorithm / pdf / gene-prediction algorithm / http / web server / regenerative medicine / /

URL

http /

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