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#	Item
11	117 THE PREDICTION OF LOCAL MODULAR STRUCTURES IN A CO-EXPRESSION NETWORK BASED ON GENE EXPRESSION DATASETS YOSHIYUKI OGATA1 Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2009-12-21 01:59:29 Biology Bioinformatics Systems biology Microarrays Gene expression Molecular biology Gene co-expression network DNA microarray Biological network Gene expression profiling KEGG Biological pathway
12	Genome Informatics 15(2): 266–Using Protein Motif Combinations to Update KEGG Pathway Maps and Orthologue Tables Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2005-04-05 02:53:51 Biology Protein families Biological databases Cell biology Bioinformatics Signal transduction Protein domains Response regulator Two-component regulatory system Pfam LSm InterPro
13	NCIBI-RCMI Workshop Translational Bioinformatics Bioinformatics Tools for the Analysis of Metabolomics Data Alla Karnovsky, Ph.D. Add to Reading List Source URL: www.ncibi.org Language: English - Date: 2010-08-05 12:28:07 Bioinformatics Biology Systems biology Biological databases Systems science Genomics Online databases KEGG GenePattern Metabolomics Gene ontology Interactome
14	Genome Informatics 11: 222–KEGG/EXPRESSION: A Database for Browsing and Analysing Microarray Expression Data Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2001-02-21 03:59:36 Biological databases Biology Microarrays Bioinformatics Systems biology Online databases Chemistry KEGG Molecular biology DNA microarray MicrobesOnline
15	Pathway analysis: Combining microarray data and physiological data to study myogenesis Add to Reading List Source URL: www.archanimbreed.com Language: English - Date: 2016-01-06 06:20:57 Biological databases Molecular biology Systems biology KEGG Biological pathway Bioinformatics Metabolic pathway Metabolism Myogenesis Skeletal muscle Transcriptome Pathway analysis
16	Pathway Analysis Tool for Metabolomics CrossPath CrossPath is the software to automatically determine the metabolic pathway that significantly changes among various experiment conditions. The researchers can easily unde Add to Reading List Source URL: www.mki.jp Language: English - Date: 2012-05-01 01:10:29 Biological databases Systems biology Metabolism Bioinformatics Online databases KEGG Human Metabolome Database Metabolic pathway Metabolomics Pathway analysis MetaboAnalyst Small Molecule Pathway Database
17	Human-microbe interplay: The human gut microbiome Add to Reading List Source URL: hmpdacc.org Language: English - Date: 2014-02-26 12:33:20 Genomics Metagenomics Bioinformatics Environmental microbiology Biological databases KEGG Omics Microbiota 16S ribosomal RNA
18	Comparative Analysis of Functional Metagenomic Annotation and the Mappability of Short Reads Rogan Carr1, Elhanan Borenstein1,2,3* 1 Department of Genome Sciences, University of Washington, Seattle, WA, United States of Add to Reading List Source URL: elbo.gs.washington.edu Language: English - Date: 2014-08-22 16:08:42 Biological databases Bioinformatics KEGG Human Microbiome Project Annotation Reference genome Microbiota BLAST GENCODE Integrated Microbial Genomes System
19	Genome Informatics 11: 268–The Role of Gene Expression Regulation in Yeast Cell Cycle Pathway Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2001-02-21 04:21:32 Cell cycle Proteins Signal transduction Biological databases KEGG Gene expression Cyclin-dependent kinase 1 Saccharomyces cerevisiae Mechanistic target of rapamycin Biochemical cascade Start point
20	Genome Informatics 13: 61–Extraction of Organism Groups from Phylogenetic Profiles Using Independent Component Analysis Add to Reading List Source URL: www.jsbi.org Language: English - Date: 2002-12-09 05:53:38 Multivariate statistics Phylogenetics Molecular biology Biological databases Genetics Independent component analysis KEGG Factor analysis Principal component analysis Homology Bioinformatics Organism

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