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Quantitative proteomics / Isotopic labeling / Mass / Isotope-coded affinity tag / Isobaric tag for relative and absolute quantitation / Isobaric labeling / Carbon-13 / Stable isotope / Chemistry / Mass spectrometry / Monoisotopic mass


Vol. 24 ISMB 2008, pages i339–i347 doi:bioinformatics/btn190 BIOINFORMATICS Matching isotopic distributions from metabolically
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isotope distribution annotation algorithm / search bounds / isotopic matched pairs annotation algorithms / chemical formula / isotopic / software tools / biological systems / dynamic programming algorithm / exhaustive search / isotopic match pair annotation algorithm / search algorithm / search bound / conventional algorithms / matched pair annotation algorithms / statistical tools / look-back matching algorithm / isotope annotation algorithm / enriched food / greedy algorithm / isotopic distribution annotation algorithm / web-based interface / dynamic programming algorithms / isotope match algorithm / noise algorithm / fixed mass difference / n-step look-back dynamic programming algorithms / look-back algorithm / dynamic programming map algorithm / match finding algorithm / isotopic annotation algorithms / /

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Department of Biostatistics / National Institute of Health / National Science Foundation / UW-Madison College of Agricultural and Life Sciences / University of Economics / Department of Computer Sciences / University of Wisconsin / Madison / Faculty of Informatics and Statistics / the University of Michigan / /

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Amy Harms / Takis Papoulias / Angela Walker / Nat / Gregory Barrett-Wilt / Morgan Kaufman / Linear / /

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fraction collector / Author / Example naïve Bayes model for estimating isotopic match distribution probabilities / /

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Mono-isotopic Match Unweighted recall Weighted / curve / Weighted recall / machine-selected peaks / /

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3 programming algorithm / noise algorithm / Our algorithm / proteomics / bioinformatics / electrophoresis / search algorithm / 1-step look-back matching algorithm / isotope distribution annotation algorithm / dynamic programming map algorithm / Biotechnology / 2-step algorithm / central technology / machine learning / matched pair annotation algorithms / IDM algorithm / 3-step look-back algorithm / isotopic distribution annotation algorithm / previous algorithm / match finding algorithm / isotopic matched pairs annotation algorithms / matching algorithm / dynamic programming algorithms / Java / peptide sequencing / isotopic match pair annotation algorithm / greedy algorithm / isotope match algorithm / isotopic annotation algorithms / http / Data Mining / dynamic programming algorithm / metabolomics / n-step look-back dynamic programming algorithms / isotope annotation algorithm / same algorithm / automated algorithm / naïve Bayes algorithm / /

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