Cytoscape

Results: 113



#Item
61Cytoscape / Mathematical and theoretical biology / Systems biology / Java enterprise platform / RabbitMQ / Apache Axis2 / Plug-in / Software / Computing / Cross-platform software

Microsoft Word - NetKarma_Version2.5_Quick_Start_Guide.docx

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Source URL: d2i.indiana.edu

Language: English - Date: 2012-02-25 00:14:38
62Cytoscape / Mathematical and theoretical biology / Science / Computing / Apache Axis / Software / Systems biology / Cross-platform software

Microsoft Word - Instructions for the NetKarma Provenance Toolkit for NS2 Experiments-sj.docx

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Source URL: d2i.indiana.edu

Language: English - Date: 2012-03-22 00:39:20
63Systems biology / KEGG / Reactome / DAVID / Cytoscape / Path / Ingenuity Systems / Bioinformatics / Science / Biological databases

Evaluating the Boundaries of Toxicity Pathway Space Using High-Throughput Environmental Chemical Data research Holly Mortensen, David Reif, David Dix, Keith Houck, Robert Kavlock, Richard Judson

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Source URL: epa.gov

Language: English - Date: 2012-05-07 10:14:01
64Mathematical and theoretical biology / Systems biology / Science / Software / Cross-platform software / Cytoscape

NetKarma Version[removed]Quick Start Guide NetKarma version[removed]Features  Rule-file enhancements: Enhancements in rule-files for processing gush command-line logs and

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Source URL: d2i.indiana.edu

Language: English - Date: 2012-04-05 22:04:11
65Cytoscape / Mathematical and theoretical biology / Systems biology / Provenance / PlanetLab / Science / Software / Cross-platform software

ExperimentProvenance:TowardsLinkstoNetworkMeasurement Data Objective Provenance Capture from Multiple Sources

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Source URL: d2i.indiana.edu

Language: English - Date: 2012-02-24 23:52:55
66Workflow technology / Computer file formats / XGMML / Workflow / GraphML / Cytoscape / Web portal / WiMAX / Computing / Markup languages / Software

NetKarma Portal Overview Design The NetKarma portal provides an experimenter

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Source URL: d2i.indiana.edu

Language: English - Date: 2012-03-19 17:59:55
67Bioinformatics / Biological databases / Molecular biology / Ontology / OBO Foundry / Cytoscape / Gene regulatory network / Gene expression / Gene / Biology / Science / Systems biology

a n a ly s i s A gene ontology inferred from molecular networks © 2012 Nature America, Inc. All rights reserved.

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Source URL: idekerlab.ucsd.edu

Language: English - Date: 2013-01-04 19:02:19
68Bioinformatics / Proteomics / Mathematical and theoretical biology / Molecular biology / Mass spectrometry software / Cytoscape / STRING / Protein–protein interaction / Data analysis / Science / Biology / Systems biology

Analyzing Protein-Protein Interactions from Affinity Purification-Mass Spectrometry Data with SAINT UNIT 8.15

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Source URL: crapome.org

Language: English - Date: 2013-03-31 20:48:01
69Bioinformatics / Proteomics / Mathematical and theoretical biology / Molecular biology / Protein–protein interaction / Interolog / Cytoscape / Two-hybrid screening / Multiprotein complex / Biology / Science / Systems biology

Conserved patterns of protein interaction in multiple species Roded Sharan*†, Silpa Suthram‡, Ryan M. Kelley‡, Tanja Kuhn§, Scott McCuine‡, Peter Uetz§, Taylor Sittler‡, Richard M. Karp*¶, and Trey Ideker‡

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Source URL: www.cs.tau.ac.il

Language: English - Date: 2005-02-03 07:42:09
70Science / Systems biology / Query languages / Web services / RDF / BioPAX / Cytoscape / SPARQL / Reactome / Computing / Semantic Web / Biology

c-Mantic: a Cytoscape Semantic Web Plugin Tutorial: Reactome Pathways Version 1.1 December 2011 http://www.epa.gov/ncct/v-liver/c-mantic

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Source URL: epa.gov

Language: English - Date: 2012-05-07 10:10:35
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