The NCBI Handbook Chapter 3: Macromolecular Structure Databases

First Page		Document Content
Protein structure Protein domains Computational phylogenetics Conserved Domain Database Entrez BLAST Pfam Sequence alignment Protein Data Bank Science Bioinformatics Biological databases		The NCBI Handbook Chapter 3: Macromolecular Structure Databases Add to Reading List Source URL: www.ncbi.nlm.nih.gov Download Document from Source Website File Size: 1,57 MB Share Document on Facebook

	Multiple sequence alignment with user-defined constraints DocID: 1vdcP - View Document
	Today’s Lecture • Multiple sequence alignment • Improved scoring of pairwise alignments – Affine gap penalties – Profiles DocID: 1uPzd - View Document
	Today’s Lecture • Finding multiple high-scoring segments • “D-segments” – relationship to 2-state HMMs • Sequence alignment & evolution DocID: 1uG7I - View Document
	Multiple Sequence Alignment: A Critical Comparison of Four Popular Programs Shirley Sutton, Biochemistry 218 Final Project, March 14, 2008 Introduction For both the computational biologist and the research biologist, the DocID: 1uprj - View Document
	Handling Rearrangements in DNA Sequence Alignment Maneesh Bhand DocID: 1ul0C - View Document